EMBO Budapest
  • Course Program
  • Introduction to Linux command-line
  • Introduction to PPI networks
  • STRING
  • Network visualization with Cytoscape
  • Chimera
  • Unseminar
  • Structure and interfaces of PPIs
  • Peptide and protein docking
  • MSA & Jalview
  • Protein Families
  • Protein Feature Prediction
  • Repeats and low complexity regions
  • Intrinsically disordered proteins
  • Short Linear Motifs
  • REST services
  • Molecular dynamics
  • Combined Cytoscape Session

STRING

by Lars Juhl Jensen

Plenary: Medical informatics

Slides in PDF and PPT format.

Protein association networks with STRING

Slides in PDF and PPT format.

Web resources:

  • STRING
  • STITCH
  • COMPARTMENTS
  • TISSUES
  • DISEASES

EMBO Budapest

Contact:
  • Tamás Szaniszló embo2016bp@ttk.elte.hu

Program and material for the EMBO Practical Course on computational analysis of protein-protein interactions: Sequences, networks and diseases", Budapest, Hungary, 30th May - 4th June 2016

Sponsors:

With assistance from: