EMBO TGAC
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  • Chimera protein structure
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  • Protein families and domains
  • Structure & interfaces of PPIs
  • Prediction of protein features
  • Repeats
  • Intrinsically disordered Protein Regions
  • Linear motif biology
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Protein Families

by Marco Punta

Presentation (PDF, Keynote)

Marco exercise files:

  • Exercise 1
    • PF03595_seed.txt
    • 3M71.pdb
  • Exercise 2
    • blast-2-seqs.link
    • cGMP-gated_cation_channel_alpha-1.fasta
    • mistery_protein.fasta
  • Exercise 3
    • jalview.fasta
    • 5B650320-65F7-11E5-8E90-C8CCF69F8818.1.fasta
    • sequence.fasta

Here are all the files together in a single archive file that you’ll have to unzip to be able to access.

EMBO TGAC

  • EMBO TGAC
  • aidan.budd@embl.de

Program and material for EMBO Practical Course on computational analysis of protein-protein interactions: From sequences to networks, taking place at TGAC, Norwich, UK, Sep-Oct 2015